Publications
Sont listées ci-dessous, par année, les publications figurant dans l'archive ouverte HAL.
2021
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GeNePy3D: a quantitative geometry python toolbox for bioimaging
- Phan Minh-Son
- Chessel Anatole
DOI : 10.12688/f1000research.27395.2 -
Drivers of i-DNA Formation in a Variety of Environments Revealed by Four-Dimensional UV Melting and Annealing
- Cheng Mingpan
- Chen Jielin
- Ju Huangxian
- Zhou Jun
- Mergny Jean-Louis
DOI : 10.1021/jacs.1c02209 -
Fluorescent iron‑sulfur centers: Photochemistry of the PetA Rieske protein from Aquifex aeolicus
- Vos Marten H.
- Salman Mayla
- Ramodiharilafy Rivo
- Liebl Ursula
DOI : 10.1016/j.bbabio.2021.148385 -
Mechanism and dynamics of fatty acid photodecarboxylase
- Sorigué Damien
- Hadjidemetriou Kyprianos
- Blangy S.
- Gotthard G.
- Bonvalet A.
- Coquelle Nicolas
- Samire P.
- Aleksandrov Alexey
- Antonucci L.
- Benachir A.
- Boutet S.
- Byrdin Martin
- Cammarata Marco
- Carbajo S.
- Cuine Stephan
- Doak R.
- Foucar L.
- Gorel A.
- Grünbein M.
- Hartmann E.
- Hienerwadel Rainer
- Hilpert M.
- Kloos M.
- Lane T.
- Légeret B.
- Legrand P.
- Li-Beisson Y.
- Moulin S.
- Nurizzo D.
- Peltier G.
- Schirò Giorgio
- Shoeman R.
- Sliwa M.
- Solinas X.
- Zhuang B.
- Barends T.
- Colletier Jacques-Philippe
- Joffre M.
- Royant Antoine
- Berthomieu C.
- Weik Martin
- Domratcheva T.
- Brettel K.
- Vos Marten H.
- Schlichting I.
- Arnoux Pascal
- Müller P.
- Beisson F.
DOI : 10.1126/science.abd5687 -
Dynamic spatiotemporal coordination of neural stem cell fate decisions occurs through local feedback in the adult vertebrate brain
- Dray Nicolas
- Mancini Laure
- Binshtok Udi
- Cheysson Felix
- Supatto Willy
- Mahou Pierre
- Bedu Sébastien
- Ortica Sara
- Than-Trong Emmanuel
- Krecsmarik Monika
- Herbert Sébastien
- Masson Jean-Baptiste
- Tinevez Jean-Yves
- Lang Gabriel
- Beaurepaire Emmanuel
- Sprinzak David
- Bally-Cuif Laure
DOI : 10.1016/j.stem.2021.03.014 -
Exploration of head-to-tail and head-to-head isomers of a guanine quadruplex platinum-based binder
- Carson Jacob Joel Kirsh
- Miron Caitlin Elizabeth
- Luo Jingwei
- Mergny Jean‐louis
- van Staalduinen Laura
- Jia Zongchao
- Petitjean Anne
DOI : 10.1016/j.ica.2020.120236 -
Analyses of viral genomes for G-quadruplex forming sequences reveal their correlation with the type of infection
- Bohálová Natália
- Cantara Alessio
- Bartas Martin
- Kaura Patrik
- Šťastný Jiří
- Pečinka Petr
- Fojta Miroslav
- Mergny Jean‐louis
- Brázda Václav
DOI : 10.1016/j.biochi.2021.03.017 -
Mueller polarimetric imaging for fast macroscopic mapping of microscopic collagen matrix remodeling by smooth muscle cells
- Chashchina Olga
- Mezouar Hachem
- Vizet Jérémy
- Raoux Clothilde
- Park Junha
- Ramón-Lozano Clara
- Schanne-Klein Marie-Claire
- Barakat Abdul I
- Pierangelo Angelo
DOI : 10.1038/s41598-021-85164-y -
Ultrafast dynamics of heme distortion in the O2-sensor of a thermophilic anaerobe bacterium
- Petrova Olga N
- Yoo Byung-Kuk
- Lamarre Isabelle
- Selles Julien
- Nioche Pierre
- Negrerie Michel
DOI : 10.1038/s42004-021-00471-9 -
Ligand Binding to Dynamically Populated G‐Quadruplex DNA
- Aznauryan Mikayel
- Noer Sofie Louise
- Pedersen Camilla
- Mergny Jean‐louis
- Teulade-Fichou Marie‐paule
- Birkedal Victoria
DOI : 10.1002/cbic.202000792 -
Influence of core extension and side chain nature in targeting G-quadruplex structures with perylene monoimide derivatives
- Busto Natalia
- García-Calvo José
- Cuevas José Vicente
- Herrera Antonio
- Mergny Jean-Louis
- Pons Sebastian
- Torroba Tomás
- García Begoña
DOI : 10.1016/j.bioorg.2021.104660 -
Characterization of Light-Induced, Short-Lived Interacting Radicals in the Active Site of Flavoprotein Ferredoxin-NADP + Oxidoreductase
- Zhuang Bo
- Seo Daisuke
- Aleksandrov Alexey
- Vos Marten H.
DOI : 10.1021/jacs.0c09627 -
Identification of the vibrational marker of tyrosine cation radical using ultrafast transient infrared spectroscopy of flavoprotein systems
- Pirisi Katalin
- Nag Lipsa
- Fekete Zsuzsanna
- Iuliano James N
- Tolentino Collado Jinnette
- Clark Ian P
- Pécsi Ildikó
- Sournia Pierre
- Liebl Ursula
- Greetham Gregory M
- Tonge Peter J
- Meech Stephen R
- Vos Marten H.
- Lukacs Andras
DOI : 10.1007/s43630-021-00024-y -
Effects of sequence and base composition on the CD and TDS profiles of i-DNA
- Iaccarino Nunzia
- Cheng Mingpan
- Qiu Dehui
- Pagano Bruno
- Amato Jussara
- Porzio Anna Di
- Zhou Jun
- Randazzo Antonio
- Mergny Jean‐louis
DOI : 10.1002/anie.202016822 -
The lncRNA 44s2 Study Applicability to the Design of 45-55 Exon Skipping Therapeutic Strategy for DMD
- Gargaun Elena
- Falcone Sestina
- Sole Guilhem
- Durigneux Julien
- Urtizberea Andoni
- Cuisset Jean Marie
- Benkhelifa-Ziyyat Sofia
- Julien Laura
- Boland Anne
- Sandron Florian
- Meyer Vincent
- Deleuze Jean François
- Salgado David
- Desvignes Jean-Pierre
- Béroud Christophe
- Chessel Anatole
- Blesius Alexia
- Krahn Martin
- Levy Nicolas
- Leturcq France
- Pietri-Rouxel France
DOI : 10.3390/biomedicines9020219 -
Thermal and pH stabilities of i-DNA: confronting in vitro experiments with models and in-cell NMR data
- Cheng Mingpan
- Qiu Dehui
- Tamon Liezel
- Ištvánková Eva
- Víšková Pavlína
- Amrane Samir
- Guédin Aurore
- Chen Jielin
- Lacroix Laurent
- Ju Huangxian
- Trantírek Lukáš
- Sahakyan Aleksandr B
- Zhou Jun
- Mergny Jean‐louis
DOI : 10.1002/anie.202016801 -
Rapid Evaluation of Novel Therapeutic Strategies Using a 3D Collagen-Based Tissue-Like Model
- Maury Pauline
- Porcel Erika
- Mau Adrien
- Lux François
- Tillement Olivier
- Mahou Pierre
- Schanne-Klein Marie-Claire
- Lacombe Sandrine
DOI : 10.3389/fbioe.2021.574035 -
Euryarchaeal genomes are folded into SMC-dependent loops and domains, but lack transcription-mediated compartmentalization
- Cockram Charlotte
- Thierry Agnès
- Gorlas Aurore
- Lestini Roxane
- Koszul Romain
DOI : 10.1016/j.molcel.2020.12.013 -
Insights into G-Quadruplex–Hemin Dynamics Using Atomistic Simulations: Implications for Reactivity and Folding
- Stadlbauer Petr
- Islam Barira
- Otyepka Michal
- Chen Jielin
- Monchaud David
- Zhou Jun
- Mergny Jean-Louis
- Šponer Jiří
DOI : 10.1021/acs.jctc.0c01176 -
Deinking Effect of Paper-Cartons Wastes on Calorifique Value of Combustibles Briquettes
- Dzokom Alexis
- Koda Joël Tize
- Darman Roger Djoulde
DOI : 10.35629/5252-030734513458 -
Human Papillomavirus G-Rich Regions as Potential Antiviral Drug Targets
- Carvalho Josué
- Lopes-Nunes Jéssica
- Campello Maria Paula Cabral
- Paulo António
- Milici Janice
- Meyers Craig
- Mergny Jean-Louis
- Salgado Gilmar
- Queiroz João
- Cruz Carla
DOI : 10.1089/nat.2020.0869 -
Targeting nucleolin by RNA G-quadruplex-forming motif
- Figueiredo Joana
- Miranda André
- Lopes-Nunes Jéssica
- Carvalho Josué
- Alexandre Daniela
- Valente Salete
- Mergny Jean‐louis
- Cruz Carla
DOI : 10.1016/j.bcp.2021.114418 -
Cyclodipeptide synthases of the NYH subfamily recognize tRNA using an α-helix enriched with positive residues
- Croitoru Anastasia
- Babin Morgan
- Myllykallio Hannu
- Gondry Muriel
- Aleksandrov Alexey
DOI : 10.1021/acs.biochem.0c00761 -
Gene level resolution of bacteria and archaea genome folding
- Cockram Charlotte
- Thierry Agnès
- Lestini Roxane
- Koszul Romain
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Core–Shell Pure Collagen Threads Extruded from Highly Concentrated Solutions Promote Colonization and Differentiation of C3H10T1/2 Cells
- Picaut Lise
- Trichet Lea
- Hélary Christophe
- Ducourthial Guillaume
- Bonnin Marie-Ange
- Haye Bernard
- Ronsin Olivier
- Schanne-Klein Marie-Claire
- Duprez Delphine
- Baumberger Tristan
- Mosser Gervaise
DOI : 10.1021/acsbiomaterials.0c01273